Performance assessment of copy number microarray platforms using a spike-in experiment

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Performance assessment of copy number microarray platforms using a spike-in experiment

MOTIVATION Changes in the copy number of chromosomal DNA segments [copy number variants (CNVs)] have been implicated in human variation, heritable diseases and cancers. Microarray-based platforms are the current established technology of choice for studies reporting these discoveries and constitute the benchmark against which emergent sequence-based approaches will be evaluated. Research that d...

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A comparison of DNA copy number profiling platforms.

The accurate mapping of recurring DNA copy number aberrations (CNAs), a hallmark feature of the cancer genome, has facilitated the discovery of tumor suppressor genes and oncogenes. Microarray-based assays designed to detect these chromosomal copy number alterations on a genome-wide and high-resolution scale have emerged as a cornerstone technology in the genomic era. The diversity of commercia...

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ژورنال

عنوان ژورنال: Bioinformatics

سال: 2011

ISSN: 1460-2059,1367-4803

DOI: 10.1093/bioinformatics/btr106